#include <SequenceExtractor.h>

Collaboration diagram for SequenceDecoder:

Public Member Functions
	SequenceDecoder (short int)
	SequenceDecoder (const SequenceDecoder &)
SequenceDecoder	operator= (const SequenceDecoder &)
	~SequenceDecoder ()
short int	getNbInputSymb ()
short int	getNbOutputSeq ()
void	setNbOutputSeq (unsigned long nb)
unsigned long	getNbOutputSeqPart ()
void	addSequence (Seq &, const short int)
void	show ()
void	toFile (ostream &)
void	save (ostream &)
void	load (istream &)
void	decode (String, ostream &, unsigned long, unsigned long, bool, bool, BNgram &)
Private Member Functions
void	_freeTree (SequenceDecoderNode *seed)
SequenceDecoderNode *	_newNode (const SymbTab &symbTab, const short int outputSymb, SequenceDecoderNode ch, SequenceDecoderNode br)
SequenceDecoderNode *	_findInsert (const SymbTab &symbTab, SequenceDecoderNode *ptr)
void	_show (SequenceDecoderNode *, short int)
void	_toFile (SequenceDecoderNode *, short int, Seq &, ostream &)
void	_save (SequenceDecoderNode *, ostream &)
SequenceDecoderNode *	_load (istream &)
bool	_decode (SequenceDecoderNode *ptr, ReadMemory &inp, ostream &outputFile, unsigned long &begin, short int &)
Private Attributes
short int	_nbInputSymb
unsigned long	_nbOutputSeqPart
unsigned long	_nbOutputSeq
SequenceDecoderNode *	_seed

Detailed Description

Definition at line 166 of file SequenceExtractor.h.

Constructor & Destructor Documentation

SequenceDecoder::SequenceDecoder ( short int nbInputSymb )

Definition at line 452 of file SequenceExtractor.cpp.

References _nbInputSymb, _nbOutputSeq, _nbOutputSeqPart, and _seed.

SequenceDecoder::SequenceDecoder ( const SequenceDecoder & obj )

Definition at line 458 of file SequenceExtractor.cpp.

SequenceDecoder::~SequenceDecoder ( )

Definition at line 466 of file SequenceExtractor.cpp.

References _freeTree(), and _seed.

Member Function Documentation

bool SequenceDecoder::_decode	(	SequenceDecoderNode *	ptr,
		ReadMemory &	inp,
		ostream &	outputFile,
		unsigned long &	begin,
		short int &	decodedSeq
	)		`[private]`

Definition at line 600 of file SequenceExtractor.cpp.

References SequenceDecoderNode::br, SequenceDecoderNode::ch, debug, ReadMemory::eof(), ReadMemory::getCurrentSymb(), ReadMemory::getIdx(), SymbTab::isIn(), ReadMemory::lecture(), SequenceDecoderNode::outputSymb, ReadMemory::setIdx(), and SequenceDecoderNode::symbTab.

Referenced by decode().

SequenceDecoderNode * SequenceDecoder::_findInsert	(	const SymbTab &	symbTab,
		SequenceDecoderNode *	ptr
	)		`[private]`

Definition at line 485 of file SequenceExtractor.cpp.

References _newNode(), SequenceDecoderNode::br, and SequenceDecoderNode::symbTab.

Referenced by addSequence().

void SequenceDecoder::_freeTree ( SequenceDecoderNode * seed ) [private]

Definition at line 469 of file SequenceExtractor.cpp.

References SequenceDecoderNode::br, SequenceDecoderNode::ch, and SequenceDecoderNode::symbTab.

Referenced by ~SequenceDecoder().

SequenceDecoderNode * SequenceDecoder::_load ( istream & inputFile ) [private]

Definition at line 544 of file SequenceExtractor.cpp.

References _nbInputSymb, _newNode(), SequenceDecoderNode::br, SequenceDecoderNode::ch, SequenceDecoderNode::outputSymb, SymbTab::setSymb(), and SequenceDecoderNode::symbTab.

Referenced by load().

SequenceDecoderNode * SequenceDecoder::_newNode	(	const SymbTab &	symbTab,
		const short int	outputSymb,
		SequenceDecoderNode *	ch,
		SequenceDecoderNode *	br
	)		`[private]`

Definition at line 476 of file SequenceExtractor.cpp.

References SequenceDecoderNode::br, SequenceDecoderNode::ch, SequenceDecoderNode::outputSymb, and SequenceDecoderNode::symbTab.

Referenced by _findInsert(), and _load().

void SequenceDecoder::_save	(	SequenceDecoderNode *	ptr,
		ostream &	outputFile
	)		`[private]`

Definition at line 578 of file SequenceExtractor.cpp.

References SequenceDecoderNode::br, SequenceDecoderNode::ch, SymbTab::getNbSymb(), SymbTab::isIn(), SequenceDecoderNode::outputSymb, and SequenceDecoderNode::symbTab.

Referenced by save().

void SequenceDecoder::_show	(	SequenceDecoderNode *	ptr,
		short int	order
	)		`[private]`

Definition at line 511 of file SequenceExtractor.cpp.

References SequenceDecoderNode::br, SequenceDecoderNode::ch, SequenceDecoderNode::outputSymb, show(), and SequenceDecoderNode::symbTab.

Referenced by show().

void SequenceDecoder::_toFile	(	SequenceDecoderNode *	ptr,
		short int	symb,
		Seq &	currentSeq,
		ostream &	outputFile
	)		`[private]`

Definition at line 520 of file SequenceExtractor.cpp.

References Seq::add(), SequenceDecoderNode::br, SequenceDecoderNode::ch, Seq::getLength(), Seq::init(), SequenceDecoderNode::outputSymb, and SequenceDecoderNode::symbTab.

Referenced by toFile().

void SequenceDecoder::addSequence	(	Seq &	sequence,
		const short int	outputSymb
	)

Definition at line 495 of file SequenceExtractor.cpp.

References _findInsert(), _nbOutputSeqPart, _seed, SequenceDecoderNode::ch, Seq::getLength(), and SequenceDecoderNode::outputSymb.

Referenced by sequenceExtractor().

void SequenceDecoder::decode	(	String	inputFilename,
		ostream &	outputFile,
		unsigned long	segBegin,
		unsigned long	segLength,
		bool	overlapMode,
		bool	ngramMode,
		BNgram &	ngram
	)